Gene Variant Detail

Contact

Missing content? – Request curation!

Request curation for specific Genes, Variants, or PubMed publications.

Have questions, comments, or suggestions? - Let us know!

Email us at : ckbsupport@jax.org

Gene ATM
Variant S1905Ifs*25
Impact List frameshift
Protein Effect loss of function - predicted
Gene Variant Descriptions ATM S1905Ifs*25 indicates a shift in the reading frame starting at amino acid 1905 and terminating 25 residues downstream causing a premature truncation of the 3056 amino acid Atm protein (UniProt.org). S1905Ifs*25 has not been characterized, however, due to the effects of other truncation mutations downstream of S1905 (PMID: 16603769), is predicted to lead to a loss of Atm protein function.
Associated Drug Resistance
Category Variants Paths

ATM mutant ATM inact mut ATM S1905Ifs*25

Filtering

  • Case insensitive filtering will display rows if any text in any cell matches the filter term
  • Use simple literal full or partial string matches
  • Separate multiple filter terms with a space. Any order may be used (i. e. a b c and c b a are equivalent )
  • Filtering will only apply to rows that are already loaded on the page. Filtering has no impact on query parameters.
  • Use quotes to match on a longer phrase with spaces (i.e. "mtor c1483f")

Sorting

  • Generally, the default sort order for tables is set to be first column ascending; however, specific tables may set a different default sort order.
  • Click on any column header arrows to sort by that column
  • Hold down the Shift key and click multiple columns to sort by more than one column. Be sure to set ascending or descending order for a given column before moving on to the next column.

Transcript NM_000051.4
gDNA chr11:g.108307934dupA
cDNA c.5712dupA
Protein p.S1905Ifs*25
Source Database RefSeq
Genome Build GRCh38/hg38
Transcript gDNA cDNA Protein Source Database Genome Build
XM_005271562.6 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
NM_000051.3 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_017017790.2 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_011542840.3 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_006718843.5 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_011542840.4 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_017017789.2 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_047426975.1 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_005271562.5 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
NM_001351834.2 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_006718843.4 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_011542843.3 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
NM_000051.4 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_011542843.2 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
NM_001351834.1 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_017017790.3 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_047426976.1 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38
XM_017017791.1 chr11:g.108307934dupA c.5712dupA p.S1905Ifs*25 RefSeq GRCh38/hg38

Filtering

  • Case insensitive filtering will display rows if any text in any cell matches the filter term
  • Use simple literal full or partial string matches
  • Separate multiple filter terms with a space. Any order may be used (i. e. a b c and c b a are equivalent )
  • Filtering will only apply to rows that are already loaded on the page. Filtering has no impact on query parameters.
  • Use quotes to match on a longer phrase with spaces (i.e. "mtor c1483f")

Sorting

  • Generally, the default sort order for tables is set to be first column ascending; however, specific tables may set a different default sort order.
  • Click on any column header arrows to sort by that column
  • Hold down the Shift key and click multiple columns to sort by more than one column. Be sure to set ascending or descending order for a given column before moving on to the next column.

Molecular Profile Indication/Tumor Type Response Type Therapy Name Approval Status Evidence Type Efficacy Evidence References
ATM S1905Ifs*25 gallbladder carcinoma predicted - sensitive Olaparib Case Reports/Case Series Actionable In a clinical case study, treatment with Lynparza (olaparib) resulted in improved clinical symptoms and progression-free survival of 13 months in a patient with gallbladder carcinoma harboring ATM S1905Ifs*25 (PMID: 32045060). 32045060